Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 AC004805.3-201ENST00000603178 310 ntBASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 BNIP3P35-201ENST00000604530 490 ntBASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 AC119674.1-220ENST00000641502 1048 ntBASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC187A0A096LP49 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CCDC187A0A096LP49 AC016251.2-201ENST00000623393 3089 ntBASIC6.34□□□□□ -1.4
CCDC187A0A096LP49 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC005702.3-201ENST00000585345 1447 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 Z97989.1-201ENST00000531702 2421 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 RNU6-1176P-201ENST00000390955 107 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 RN7SKP199-201ENST00000410325 305 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 GTF2IP14-201ENST00000441415 586 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 MTND5P8-201ENST00000449817 1083 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC018638.3-201ENST00000461273 132 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 RN7SL221P-201ENST00000466190 281 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 ABCA11P-202ENST00000504019 2110 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 OR7E10P-201ENST00000526420 991 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 TRIM51DP-201ENST00000529746 596 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AP004609.2-201ENST00000532177 190 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 ULK4P1-202ENST00000565174 503 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 RN7SL404P-201ENST00000582421 281 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC087575.1-201ENST00000585087 229 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 OR4H6P-202ENST00000603819 340 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC135803.1-201ENST00000608748 565 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC084036.1-201ENST00000609190 508 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AP002345.2-201ENST00000609961 904 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AL136097.3-201ENST00000611097 505 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC084824.5-201ENST00000612009 413 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 DDX43P1-201ENST00000510713 1763 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AL078595.2-201ENST00000605309 1780 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC120036.2-201ENST00000509729 1474 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 AC138915.4-201ENST00000565549 4147 ntBASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC187A0A096LP49 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC187A0A096LP49 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC187A0A096LP49 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC187A0A096LP49 AC020978.6-201ENST00000571197 3177 ntBASIC6.32□□□□□ -1.4
CCDC187A0A096LP49 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC187A0A096LP49 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC187A0A096LP49 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC187A0A096LP49 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC187A0A096LP49 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms