Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC104307.1-201ENST00000616142 196 ntBASIC7.65□□□□□ -1.18
CTDP1Q9Y5B0 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
CTDP1Q9Y5B0 AC083806.2-201ENST00000617795 2685 ntBASIC7.65□□□□□ -1.18
CTDP1Q9Y5B0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.65□□□□□ -1.18
CTDP1Q9Y5B0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CTDP1Q9Y5B0 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CTDP1Q9Y5B0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.65□□□□□ -1.19
CTDP1Q9Y5B0 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CTDP1Q9Y5B0 LINC01613-201ENST00000561476 2780 ntBASIC7.65□□□□□ -1.19
CTDP1Q9Y5B0 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 MRPS17P1-201ENST00000596009 3130 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 RN7SKP237-201ENST00000364663 301 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 SNORA72.3-201ENST00000365074 132 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 RNU1-84P-201ENST00000365447 164 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 GTF3AP6-201ENST00000432585 986 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AL354893.1-201ENST00000433735 348 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC114878.1-201ENST00000441166 358 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 RN7SL170P-201ENST00000487098 295 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC112484.3-201ENST00000505910 329 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC008429.2-201ENST00000523057 864 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC025857.1-201ENST00000525252 377 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC026956.1-201ENST00000558741 396 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AL589993.1-201ENST00000407450 2524 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 AC023245.2-201ENST00000530760 2978 ntBASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CTDP1Q9Y5B0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 RNA5SP512-201ENST00000364550 120 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 RNA5SP77-201ENST00000365394 120 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 GTF3AP1-201ENST00000416942 1004 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 MTND4P11-201ENST00000417020 1058 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 MRPS21P5-201ENST00000417885 231 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 VN1R20P-201ENST00000425215 966 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AL020997.1-201ENST00000446554 349 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 CTSLP6-201ENST00000458273 1002 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 H3F3AP5-201ENST00000475267 429 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AC021006.1-201ENST00000489849 553 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 SNORA74.1-201ENST00000516320 180 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 BCAS2P1-201ENST00000528022 632 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 CR383656.14-201ENST00000551951 406 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AL162632.2-201ENST00000553933 399 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AL591767.3-201ENST00000554632 525 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AP003115.1-201ENST00000569849 463 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 SNORA70D-201ENST00000578836 135 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms