Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 NPM1P36-201ENST00000415681 835 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AL713922.1-201ENST00000416477 747 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 UBFD1P1-201ENST00000473259 814 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 Y_RNA.710-201ENST00000516975 110 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AC100767.2-201ENST00000604840 693 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AC092681.3-201ENST00000609463 678 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AC073862.4-201ENST00000622982 854 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 GUCY1B2-204ENST00000531898 1979 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC119674.1-202ENST00000641333 1860 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 SNORA21-201ENST00000362423 132 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 RNU1-49P-201ENST00000363468 159 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC005522.1-201ENST00000395416 346 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 HMGN1P20-201ENST00000411849 300 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 FTH1P10-202ENST00000430907 550 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 RPL6P30-201ENST00000443382 862 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 RNA5SP438-201ENST00000516561 112 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC008521.2-201ENST00000591021 259 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC063952.1-203ENST00000634410 658 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 AL591848.4-201ENST00000567832 3472 ntBASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SHROOM1Q2M3G4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC011455.2-201ENST00000599320 3336 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AP003119.3-201ENST00000566747 4192 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 TNPO1P2-201ENST00000426249 2665 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 SLC20A1P1-201ENST00000413906 956 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 HSPE1P27-201ENST00000430808 296 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms