Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH4P55283 AC023310.2-201ENST00000553844 547 ntBASIC6.48□□□□□ -1.37
CDH4P55283 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH4P55283 SETP3-201ENST00000581726 813 ntBASIC6.48□□□□□ -1.37
CDH4P55283 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH4P55283 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH4P55283 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.48□□□□□ -1.37
CDH4P55283 RPSAP75-201ENST00000605848 301 ntBASIC6.48□□□□□ -1.37
CDH4P55283 AC024255.1-201ENST00000614376 102 ntBASIC6.48□□□□□ -1.37
CDH4P55283 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH4P55283 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH4P55283 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CDH4P55283 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDH4P55283 AP003486.1-201ENST00000525716 3994 ntBASIC6.48□□□□□ -1.37
CDH4P55283 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH4P55283 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH4P55283 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH4P55283 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH4P55283 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH4P55283 AL157831.2-201ENST00000564681 3095 ntBASIC6.48□□□□□ -1.37
CDH4P55283 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH4P55283 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH4P55283 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH4P55283 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDH4P55283 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CDH4P55283 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDH4P55283 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDH4P55283 RNA5SP279-201ENST00000365513 117 ntBASIC6.47□□□□□ -1.37
CDH4P55283 RN7SKP121-201ENST00000410842 305 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AL035422.1-201ENST00000414193 397 ntBASIC6.47□□□□□ -1.37
CDH4P55283 UBE2V1P14-201ENST00000415815 558 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH4P55283 AC092865.3-201ENST00000425390 1026 ntBASIC6.47□□□□□ -1.37
CDH4P55283 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 AC108479.1-201ENST00000431142 427 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH4P55283 AL354893.1-201ENST00000433735 348 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AC095052.1-201ENST00000509955 863 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AC018797.1-201ENST00000510791 255 ntBASIC6.47□□□□□ -1.37
CDH4P55283 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.47□□□□□ -1.37
CDH4P55283 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.47□□□□□ -1.37
CDH4P55283 RNA5SP116-201ENST00000516132 98 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 AC036111.2-201ENST00000533247 901 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH4P55283 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH4P55283 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH4P55283 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH4P55283 AC067852.5-201ENST00000589299 310 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.47□□□□□ -1.37
CDH4P55283 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH4P55283 AC010998.3-201ENST00000613871 631 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH4P55283 AL445649.1-201ENST00000615941 691 ntBASIC6.47□□□□□ -1.37
CDH4P55283 TCL6_3.1-201ENST00000619064 137 ntBASIC6.47□□□□□ -1.37
CDH4P55283 AL683826.1-201ENST00000624104 627 ntBASIC6.47□□□□□ -1.37
CDH4P55283 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH4P55283 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH4P55283 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH4P55283 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH4P55283 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH4P55283 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH4P55283 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 BRD7P6-201ENST00000431406 1860 ntBASIC6.47□□□□□ -1.37
CDH4P55283 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CDH4P55283 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH4P55283 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH4P55283 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.46□□□□□ -1.37
CDH4P55283 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH4P55283 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDH4P55283 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.46□□□□□ -1.37
CDH4P55283 GUCY1B2-204ENST00000531898 1979 ntBASIC6.46□□□□□ -1.37
CDH4P55283 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH4P55283 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDH4P55283 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH4P55283 OFD1P17-201ENST00000437639 3018 ntBASIC6.46□□□□□ -1.38
CDH4P55283 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms