Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD12P35452 PSMA6P2-201ENST00000457574 686 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD12P35452 RPL12P24-201ENST00000474907 486 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 H3F3AP5-201ENST00000475267 429 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD12P35452 SUMO2P4-201ENST00000504193 276 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC112484.3-201ENST00000505910 329 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 COL6A4P2-205ENST00000509855 506 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC091849.1-201ENST00000509920 121 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AP004607.6-201ENST00000525033 1202 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC110056.1-201ENST00000525759 911 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD12P35452 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD12P35452 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.72□□□□□ -1.33
HOXD12P35452 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD12P35452 AC083837.1-201ENST00000565297 2994 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AL078601.3-201ENST00000573303 535 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD12P35452 RN7SL753P-201ENST00000581238 290 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXD12P35452 SMIM12P1-201ENST00000603004 274 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 RPL21P136-201ENST00000605378 396 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC092574.1-201ENST00000609771 420 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 BX323046.1-201ENST00000610145 535 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD12P35452 AL121583.1-201ENST00000612444 682 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXD12P35452 AL138960.1-201ENST00000613838 513 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AC009120.7-201ENST00000623452 780 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 AL354702.2-202ENST00000641481 890 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 CDY5P-201ENST00000411487 1580 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 CDY9P-201ENST00000451397 1580 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD12P35452 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXD12P35452 AC022417.1-201ENST00000624768 1303 ntBASIC6.72□□□□□ -1.33
HOXD12P35452 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD12P35452 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD12P35452 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD12P35452 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD12P35452 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXD12P35452 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.71□□□□□ -1.33
HOXD12P35452 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.71□□□□□ -1.33
HOXD12P35452 MAPK10-379ENST00000642013 1385 ntBASIC6.71□□□□□ -1.33
HOXD12P35452 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
HOXD12P35452 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HOXD12P35452 AC022034.1-201ENST00000512867 2156 ntBASIC6.71□□□□□ -1.33
HOXD12P35452 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
HOXD12P35452 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXD12P35452 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD12P35452 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 IFIT1P1-201ENST00000400497 1449 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
HOXD12P35452 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD12P35452 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD12P35452 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HOXD12P35452 Y_RNA.62-201ENST00000362840 99 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 AL136116.2-201ENST00000404020 785 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 RN7SKP240-201ENST00000410583 375 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 AC013470.3-201ENST00000420252 1194 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXD12P35452 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD12P35452 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD12P35452 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 TPRKBP1-201ENST00000456243 481 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 AGGF1P3-201ENST00000493675 1213 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.71□□□□□ -1.34
HOXD12P35452 UGT2A3P7-201ENST00000510485 734 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 SAA3P-201ENST00000533267 365 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 AP000919.1-201ENST00000582850 985 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXD12P35452 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 MIR6721-201ENST00000617181 87 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 AL359742.1-201ENST00000622497 540 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 AC025262.3-201ENST00000623666 360 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 AP001962.1-201ENST00000624114 559 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 AC011008.2-201ENST00000624866 3352 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXD12P35452 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
HOXD12P35452 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXD12P35452 Z83820.1-201ENST00000456978 1499 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD12P35452 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXD12P35452 AL033543.1-201ENST00000623440 13454 ntBASIC6.71□□□□□ -1.34
HOXD12P35452 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms