Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXA9P31269 IGLV3-6-201ENST00000523937 250 ntBASIC6.64□□□□□ -1.35
HOXA9P31269 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXA9P31269 AC007956.1-201ENST00000555623 542 ntBASIC6.64□□□□□ -1.35
HOXA9P31269 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXA9P31269 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXA9P31269 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXA9P31269 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HOXA9P31269 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXA9P31269 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXA9P31269 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXA9P31269 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXA9P31269 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXA9P31269 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXA9P31269 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXA9P31269 MROH3P-201ENST00000435735 2676 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXA9P31269 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 RNA5SP110-201ENST00000362638 115 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.63□□□□□ -1.35
HOXA9P31269 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 RPS21P8-201ENST00000413365 247 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
HOXA9P31269 IPPKP1-201ENST00000422501 768 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.63□□□□□ -1.35
HOXA9P31269 NEK2P2-201ENST00000438441 1338 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 AC011742.2-201ENST00000443818 352 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 PABPC1P8-201ENST00000452851 2086 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 RPL34P33-201ENST00000486062 334 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 AC010343.2-201ENST00000510162 224 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 OR51A1P-201ENST00000511110 946 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.63□□□□□ -1.35
HOXA9P31269 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 AP003396.4-201ENST00000527574 265 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 MIR3614-201ENST00000581261 86 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 CYCSP1-201ENST00000604815 315 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXA9P31269 MIR7159-201ENST00000620587 66 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXA9P31269 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.63□□□□□ -1.35
HOXA9P31269 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
HOXA9P31269 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 AL596244.1-201ENST00000567068 3779 ntBASIC6.63□□□□□ -1.35
HOXA9P31269 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.63□□□□□ -1.35
HOXA9P31269 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HOXA9P31269 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXA9P31269 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 OR7E25P-201ENST00000344844 931 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 SNORA21-201ENST00000362423 132 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXA9P31269 RPS3P2-201ENST00000421346 701 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC023141.3-201ENST00000436698 278 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 OR3D1P-201ENST00000438288 955 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 ATP5LP2-201ENST00000440646 311 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 AC002553.3-201ENST00000453002 341 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 SETP20-201ENST00000457046 852 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC098847.1-201ENST00000473094 348 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXA9P31269 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXA9P31269 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXA9P31269 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 RPA2P1-201ENST00000556557 721 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.62□□□□□ -1.35
HOXA9P31269 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC068768.2-201ENST00000602352 343 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms