Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SPTA1P02549 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 EIF3EP1-201ENST00000433978 1316 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.81□□□□□ -1.48
SPTA1P02549 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 RPA2P2-201ENST00000419698 796 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 AC023141.3-201ENST00000436698 278 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 AC002504.1-201ENST00000438281 691 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC5.81□□□□□ -1.48
SPTA1P02549 AC135721.2-201ENST00000464237 300 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.81□□□□□ -1.48
SPTA1P02549 OR51A1P-201ENST00000511110 946 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 AL512310.9-201ENST00000553311 948 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
SPTA1P02549 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SPTA1P02549 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.81□□□□□ -1.48
SPTA1P02549 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.81□□□□□ -1.48
SPTA1P02549 AC096708.4-201ENST00000620563 552 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 AC105105.5-201ENST00000622635 1294 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 CCDC162P-202ENST00000368966 6751 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC5.81□□□□□ -1.48
SPTA1P02549 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 TRIM60P19-201ENST00000452879 1462 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SPTA1P02549 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.81□□□□□ -1.48
SPTA1P02549 AC022819.1-201ENST00000563495 3910 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.81□□□□□ -1.48
SPTA1P02549 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 AC006141.1-201ENST00000581917 2170 ntBASIC5.81□□□□□ -1.48
SPTA1P02549 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPTA1P02549 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SPTA1P02549 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC5.81□□□□□ -1.48
SPTA1P02549 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 RNU6-171P-201ENST00000384354 107 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 MIR1203-201ENST00000408812 85 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.8□□□□□ -1.48
SPTA1P02549 MTCYBP21-201ENST00000443300 1113 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SPTA1P02549 RPS29P22-201ENST00000472363 168 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 OR4D12P-201ENST00000509361 911 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 IGHV4-55-201ENST00000520889 368 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC5.8□□□□□ -1.48
SPTA1P02549 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.8□□□□□ -1.48
SPTA1P02549 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC5.8□□□□□ -1.48
SPTA1P02549 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SPTA1P02549 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC5.8□□□□□ -1.48
SPTA1P02549 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC5.8□□□□□ -1.48
SPTA1P02549 NEPNP-201ENST00000404786 1371 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 TRIM51HP-202ENST00000530412 1823 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.8□□□□□ -1.48
SPTA1P02549 U3.7-201ENST00000363668 216 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.8□□□□□ -1.48
SPTA1P02549 DEFA9P-201ENST00000433042 285 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 AC093890.1-201ENST00000502554 540 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.8□□□□□ -1.48
SPTA1P02549 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.8□□□□□ -1.48
SPTA1P02549 OR5D15P-201ENST00000531671 942 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.8□□□□□ -1.48
SPTA1P02549 AC090236.2-201ENST00000587933 1101 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 AC108673.3-201ENST00000609183 335 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.8□□□□□ -1.48
SPTA1P02549 AC061975.7-201ENST00000592016 2692 ntBASIC5.8□□□□□ -1.48
SPTA1P02549 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPTA1P02549 RNA5SP375-201ENST00000362975 119 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.79□□□□□ -1.48
SPTA1P02549 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SPTA1P02549 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.79□□□□□ -1.48
SPTA1P02549 NPM1P4-201ENST00000414095 812 ntBASIC5.79□□□□□ -1.48
SPTA1P02549 RPS7P8-201ENST00000418311 581 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms