Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 WDR45BP1-201ENST00000583470 1029 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 MIR4428-201ENST00000584884 73 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 ACTG1P22-201ENST00000603793 1099 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC073857.1-201ENST00000625082 1054 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC140479.4-205ENST00000636339 820 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 MAPK10-350ENST00000641777 965 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC004076.2-201ENST00000620532 3323 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 RNA5SP478-201ENST00000364657 115 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 RNU1-55P-201ENST00000365510 158 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 RPS27AP6-201ENST00000427962 448 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 OR52U1P-201ENST00000439752 923 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 RPL23AP28-201ENST00000448062 470 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 RN7SL492P-201ENST00000460700 295 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 RPS16P9-201ENST00000477220 427 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 RN7SL654P-201ENST00000479178 292 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 MIR4800-201ENST00000537353 80 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 PPIAP6-201ENST00000557078 499 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 MIR5682-201ENST00000584864 76 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC010503.3-201ENST00000594355 540 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC007347.2-201ENST00000623044 180 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC005753.1-201ENST00000623837 618 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 TUBBP10-201ENST00000427668 1301 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20AQ9NP66 AL022311.1-201ENST00000623726 19416 ntBASIC5.7□□□□□ -1.5
HMG20AQ9NP66 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 RNA5SP474-201ENST00000391234 90 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 USP24P1-201ENST00000433802 779 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC073410.1-201ENST00000435125 589 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC027124.1-201ENST00000440852 466 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC026774.2-201ENST00000513990 1098 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 RNA5SP318-201ENST00000516352 92 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms