Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CHTF8P1-201ENST00000414660 1541 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AC142384.1-201ENST00000566346 1549 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AHCYL2-210ENST00000490911 1884 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 APBA2-204ENST00000558259 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 Y_RNA.73-201ENST00000362910 113 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 SNORA70.1-201ENST00000363367 141 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 RN7SKP193-201ENST00000364488 306 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 RNU6-384P-201ENST00000364900 104 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 Y_RNA.437-201ENST00000384113 113 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 Y_RNA.528-201ENST00000384575 108 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 SNORA79-201ENST00000408376 140 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AL121994.1-201ENST00000413189 402 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AC009963.1-201ENST00000417265 157 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AC244107.1-201ENST00000442033 332 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AL500522.2-201ENST00000448562 343 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AC092916.2-201ENST00000462510 417 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 RPL23AP70-201ENST00000483361 460 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AL645949.2-201ENST00000513434 786 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 TMEM185AP1-201ENST00000524311 546 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AC016256.1-201ENST00000547971 354 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 CTSLP2-201ENST00000580501 394 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 CCDC144NL-AS1-214ENST00000581958 1188 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 LINC00969-286ENST00000627297 708 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 AC068587.10-201ENST00000641210 219 ntBASIC5.9□□□□□ -1.46
KRTAP3-3Q9BYR6 C1orf127-201ENST00000377004 2761 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CYP17A1-207ENST00000639393 1684 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CAPN9-202ENST00000354537 2484 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 AC008764.9-201ENST00000624284 2505 ntBASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CSPG4P11-201ENST00000560634 4910 ntBASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CHI3L2-203ENST00000445067 2169 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 IGBP1-201ENST00000342206 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 AC114980.1-201ENST00000505668 3157 ntBASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP3-3Q9BYR6 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 AC011933.2-201ENST00000578539 2790 ntBASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 ARHGAP17-202ENST00000303665 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 TMCC1P1-201ENST00000518897 1980 ntBASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 AL445471.2-201ENST00000568143 2443 ntBASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 EYA3-202ENST00000373864 2459 ntTSL 5 BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 PSTPIP2-201ENST00000409746 3000 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
KRTAP3-3Q9BYR6 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms