Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.86□□□□□ -1.15
NPAS4Q8IUM7 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.86□□□□□ -1.15
NPAS4Q8IUM7 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS4Q8IUM7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.86□□□□□ -1.15
NPAS4Q8IUM7 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS4Q8IUM7 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.86□□□□□ -1.15
NPAS4Q8IUM7 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 TRIM53CP-201ENST00000531490 1354 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 OR5H2-201ENST00000355273 945 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 MIR99A-201ENST00000384906 81 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 RNU6-1242P-201ENST00000391052 103 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 OOSP1-201ENST00000398992 1270 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC099535.1-201ENST00000408928 371 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 RNA5SP280-201ENST00000411230 115 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AL590806.1-201ENST00000415818 853 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 Z75741.2-201ENST00000417272 1167 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 HIGD1AP12-201ENST00000427832 281 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 Z68868.1-201ENST00000429048 544 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 GAPDHP34-201ENST00000432112 823 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AL008629.1-201ENST00000438615 184 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 WDR82P2-201ENST00000444540 928 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 RPL34P26-201ENST00000445636 354 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC068135.1-201ENST00000446164 246 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 RHEBP1-201ENST00000448647 556 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 MRPL35P4-201ENST00000453682 566 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 HSPE1P22-201ENST00000456856 327 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC108120.1-201ENST00000506543 991 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 IGKV3D-31-201ENST00000519131 281 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AL356057.1-201ENST00000533798 831 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 EEF1B2P1-201ENST00000567221 672 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC040162.2-201ENST00000573092 157 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 RN7SL667P-201ENST00000582817 298 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AL158042.1-201ENST00000605338 460 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AC009318.3-201ENST00000616916 503 ntBASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS4Q8IUM7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 NLRP9P1-201ENST00000540920 2655 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 RN7SKP55-201ENST00000364888 307 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms