Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC019084.1-201ENST00000457337 432 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 RN7SL168P-201ENST00000463821 279 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AC113367.2-201ENST00000505749 160 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 RNA5SP206-201ENST00000516703 121 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 CYCSP25-201ENST00000525280 316 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AC005632.2-201ENST00000564271 828 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 RN7SL230P-201ENST00000580835 303 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 MIR6806-201ENST00000622141 64 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 CASC19-246ENST00000641625 1606 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 LCOR-201ENST00000286067 4542 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC078880.4-201ENST00000617627 1749 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC005332.9-201ENST00000620266 2921 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AP003170.5-201ENST00000397185 335 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AL023284.3-201ENST00000407767 334 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 RNA5SP251-201ENST00000410614 137 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AL157884.1-201ENST00000424561 454 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC090115.2-201ENST00000548060 883 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 MIR3154-201ENST00000577829 84 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 AC021422.1-201ENST00000621212 473 ntBASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.62□□□□□ -1.35
RFWD3Q6PCD5 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 AC010624.4-201ENST00000597606 1351 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 OR11H13P-201ENST00000359695 979 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 AL157702.1-201ENST00000398764 426 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 CYCSP52-201ENST00000422857 310 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 CXCR2P1-202ENST00000443392 1074 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 AC090616.1-201ENST00000583895 447 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 AL135999.3-201ENST00000610501 812 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 AC004836.1-201ENST00000623032 634 ntBASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RFWD3Q6PCD5 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms