Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AL359704.2-201ENST00000604335 521 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AL049840.6-201ENST00000604583 345 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AC068870.2-201ENST00000620635 389 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AP003972.1-201ENST00000625192 5446 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 GAPDHP24-201ENST00000328713 983 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 RNA5SP375-201ENST00000362975 119 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 FTH1P10-202ENST00000430907 550 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 FMO7P-201ENST00000436045 768 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 CDH12P4-201ENST00000517835 295 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 CDH12P3-201ENST00000517935 295 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 CDH12P1-201ENST00000518435 295 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AL445222.1-201ENST00000607259 628 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 AL137246.2-201ENST00000613439 662 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 OR7A1P-202ENST00000641542 1158 ntBASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.04□□□□□ -0.8
SNAPC4Q5SXM2 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 MFSD8-217ENST00000641178 4374 ntBASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 PDZK1P1-202ENST00000425209 1350 ntBASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 OR11H13P-201ENST00000359695 979 ntBASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 MIR1286-201ENST00000408112 78 ntBASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 GAPDHP71-201ENST00000511530 1003 ntBASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 AC097467.4-201ENST00000605504 141 ntBASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SNAPC4Q5SXM2 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
SNAPC4Q5SXM2 AC119674.1-204ENST00000641348 1343 ntBASIC10.02□□□□□ -0.8
SNAPC4Q5SXM2 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SNAPC4Q5SXM2 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SNAPC4Q5SXM2 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 AC092725.2-201ENST00000567658 1389 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 RN7SKP125-201ENST00000410481 302 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 AL096829.1-201ENST00000413677 457 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 ELOCP3-201ENST00000439303 348 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 RPL12P3-201ENST00000440080 396 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 AC026254.2-201ENST00000475295 371 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 AC010343.2-201ENST00000510162 224 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 AL359976.1-201ENST00000418655 3528 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 AC127024.8-201ENST00000623719 2094 ntBASIC10.02□□□□□ -0.81
SNAPC4Q5SXM2 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 RPL35AP28-201ENST00000459730 331 ntBASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 AC091965.3-201ENST00000506236 208 ntBASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 HIGD1AP14-201ENST00000507617 282 ntBASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 OR8G3P-201ENST00000533406 921 ntBASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 AL445649.1-201ENST00000615941 691 ntBASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 AC096861.1-201ENST00000616652 240 ntBASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC10.01□□□□□ -0.81
SNAPC4Q5SXM2 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms