Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL451046.1-201ENST00000406097 534 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AL033519.1-201ENST00000407266 307 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC007562.1-201ENST00000421819 517 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 NPM1P23-201ENST00000440193 849 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AL356121.1-201ENST00000442911 156 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AL031681.1-201ENST00000443304 400 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC023274.2-201ENST00000445264 521 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC073476.1-201ENST00000452854 407 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC115223.1-201ENST00000466377 870 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 RNA5SP418-201ENST00000515951 117 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 RNA5SP400-201ENST00000517155 111 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC009729.1-201ENST00000548873 1133 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC027229.1-201ENST00000583887 253 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC005332.4-201ENST00000592752 579 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AL390877.1-201ENST00000605704 214 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
HMGCS1Q01581 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCS1Q01581 AC092692.1-201ENST00000623625 2595 ntBASIC6.05□□□□□ -1.44
HMGCS1Q01581 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC068769.1-201ENST00000474767 2426 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC096921.2-201ENST00000561507 1916 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 RPS21P8-201ENST00000413365 247 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 HMGA1P8-201ENST00000414130 321 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 MTND4LP17-201ENST00000414607 293 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC064862.5-201ENST00000440618 334 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 SNRPCP11-201ENST00000492453 205 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 MIR7159-201ENST00000620587 66 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC068213.1-201ENST00000625124 226 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AL136984.1-201ENST00000607611 1893 ntBASIC6.04□□□□□ -1.44
HMGCS1Q01581 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HMGCS1Q01581 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGCS1Q01581 AL121768.1-201ENST00000613917 2544 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS1Q01581 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGCS1Q01581 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 RNA5SP85-201ENST00000365378 119 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 AL034417.1-201ENST00000399343 800 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 UBTFL2-201ENST00000411859 1191 ntBASIC6.03□□□□□ -1.44
HMGCS1Q01581 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGCS1Q01581 AL645939.3-201ENST00000435408 225 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms