Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.28□□□□□ -1.24
CCNA1P78396 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.28□□□□□ -1.24
CCNA1P78396 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 LCOR-201ENST00000286067 4542 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
CCNA1P78396 LYPLA1P3-201ENST00000402650 695 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 CYCSP52-201ENST00000422857 310 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 RPL23AP19-201ENST00000436229 369 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 AL353662.1-201ENST00000439099 327 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 AC002486.2-201ENST00000447806 590 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 HIGD1AP16-201ENST00000450986 258 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 HLA-DPA3-207ENST00000454398 229 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
CCNA1P78396 PPIAP19-201ENST00000486414 492 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 RN7SL214P-201ENST00000487317 265 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.28□□□□□ -1.24
CCNA1P78396 AC006499.4-201ENST00000510947 694 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 AC106800.3-201ENST00000511389 308 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.28□□□□□ -1.24
CCNA1P78396 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.28□□□□□ -1.24
CCNA1P78396 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.28□□□□□ -1.24
CCNA1P78396 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.28□□□□□ -1.24
CCNA1P78396 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.28□□□□□ -1.24
CCNA1P78396 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CCNA1P78396 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.28□□□□□ -1.24
CCNA1P78396 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
CCNA1P78396 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CCNA1P78396 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 AC062022.1-201ENST00000451026 1684 ntBASIC7.28□□□□□ -1.24
CCNA1P78396 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.28□□□□□ -1.24
CCNA1P78396 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCNA1P78396 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.28□□□□□ -1.24
CCNA1P78396 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CCNA1P78396 AC104162.1-201ENST00000430831 2382 ntBASIC7.27□□□□□ -1.24
CCNA1P78396 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.24
CCNA1P78396 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
CCNA1P78396 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CCNA1P78396 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.27□□□□□ -1.25
CCNA1P78396 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 AL451046.1-201ENST00000406097 534 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 HSPE1P27-201ENST00000430808 296 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.27□□□□□ -1.25
CCNA1P78396 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.27□□□□□ -1.25
CCNA1P78396 CFL1P4-201ENST00000451536 498 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 ACA64.1-201ENST00000459171 127 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 RPL34P33-201ENST00000486062 334 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 AL158068.1-201ENST00000506116 616 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 AC091965.3-201ENST00000506236 208 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.27□□□□□ -1.25
CCNA1P78396 RN7SKP238-201ENST00000516483 249 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 IGHV3-57-201ENST00000520143 280 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 AC073333.2-201ENST00000603589 769 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.27□□□□□ -1.25
CCNA1P78396 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 AC103703.1-201ENST00000634783 663 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 CYP2G2P-201ENST00000594920 1485 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.27□□□□□ -1.25
CCNA1P78396 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CCNA1P78396 NEK2P4-201ENST00000425793 1329 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 AL512310.3-201ENST00000547023 1335 ntBASIC7.27□□□□□ -1.25
CCNA1P78396 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCNA1P78396 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.26□□□□□ -1.25
CCNA1P78396 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms