Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.84□□□□□ -1.31
CASP4P49662 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.84□□□□□ -1.31
CASP4P49662 H3F3AP5-201ENST00000475267 429 ntBASIC6.84□□□□□ -1.31
CASP4P49662 RPL17P2-201ENST00000491913 451 ntBASIC6.84□□□□□ -1.31
CASP4P49662 OR4D12P-201ENST00000509361 911 ntBASIC6.84□□□□□ -1.31
CASP4P49662 AC010343.2-201ENST00000510162 224 ntBASIC6.84□□□□□ -1.31
CASP4P49662 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.84□□□□□ -1.31
CASP4P49662 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CASP4P49662 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.84□□□□□ -1.31
CASP4P49662 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.84□□□□□ -1.31
CASP4P49662 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.84□□□□□ -1.31
CASP4P49662 AC138207.8-204ENST00000579588 527 ntBASIC6.84□□□□□ -1.31
CASP4P49662 AC022106.1-201ENST00000612834 766 ntBASIC6.84□□□□□ -1.31
CASP4P49662 AL137246.2-201ENST00000613439 662 ntBASIC6.84□□□□□ -1.31
CASP4P49662 uc_338.29-201ENST00000615099 168 ntBASIC6.84□□□□□ -1.31
CASP4P49662 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.84□□□□□ -1.31
CASP4P49662 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.84□□□□□ -1.31
CASP4P49662 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CASP4P49662 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CASP4P49662 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CASP4P49662 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.84□□□□□ -1.31
CASP4P49662 AL033543.1-201ENST00000623440 13454 ntBASIC6.84□□□□□ -1.32
CASP4P49662 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CASP4P49662 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CASP4P49662 HDAC1P2-201ENST00000453661 1398 ntBASIC6.83□□□□□ -1.32
CASP4P49662 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 LINC01613-201ENST00000561476 2780 ntBASIC6.83□□□□□ -1.32
CASP4P49662 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
CASP4P49662 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CASP4P49662 AC018717.1-201ENST00000457712 1505 ntBASIC6.83□□□□□ -1.32
CASP4P49662 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 AC010086.1-201ENST00000437359 1052 ntBASIC6.83□□□□□ -1.32
CASP4P49662 SOCS5P1-201ENST00000440415 949 ntBASIC6.83□□□□□ -1.32
CASP4P49662 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 MORF4-201ENST00000447135 971 ntBASIC6.83□□□□□ -1.32
CASP4P49662 RANP2-201ENST00000456833 229 ntBASIC6.83□□□□□ -1.32
CASP4P49662 AL022319.1-201ENST00000458183 1167 ntBASIC6.83□□□□□ -1.32
CASP4P49662 AC073594.1-201ENST00000462065 364 ntBASIC6.83□□□□□ -1.32
CASP4P49662 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.83□□□□□ -1.32
CASP4P49662 AC098818.1-201ENST00000478593 252 ntBASIC6.83□□□□□ -1.32
CASP4P49662 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 CYCSP25-201ENST00000525280 316 ntBASIC6.83□□□□□ -1.32
CASP4P49662 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.83□□□□□ -1.32
CASP4P49662 AP001858.2-201ENST00000536213 601 ntBASIC6.83□□□□□ -1.32
CASP4P49662 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CASP4P49662 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.83□□□□□ -1.32
CASP4P49662 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.83□□□□□ -1.32
CASP4P49662 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CASP4P49662 AC005632.2-201ENST00000564271 828 ntBASIC6.83□□□□□ -1.32
CASP4P49662 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.83□□□□□ -1.32
CASP4P49662 NPIPB1P-202ENST00000588786 828 ntBASIC6.83□□□□□ -1.32
CASP4P49662 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.83□□□□□ -1.32
CASP4P49662 AC087269.2-201ENST00000641764 975 ntBASIC6.83□□□□□ -1.32
CASP4P49662 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CASP4P49662 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 Z93929.1-201ENST00000418200 1475 ntBASIC6.83□□□□□ -1.32
CASP4P49662 AC096921.2-201ENST00000561507 1916 ntBASIC6.83□□□□□ -1.32
CASP4P49662 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CASP4P49662 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.82□□□□□ -1.32
CASP4P49662 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.82□□□□□ -1.32
CASP4P49662 AC092692.1-201ENST00000623625 2595 ntBASIC6.82□□□□□ -1.32
CASP4P49662 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.82□□□□□ -1.32
CASP4P49662 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 AC022507.1-201ENST00000548349 1505 ntBASIC6.82□□□□□ -1.32
CASP4P49662 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CASP4P49662 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.82□□□□□ -1.32
CASP4P49662 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CASP4P49662 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.82□□□□□ -1.32
CASP4P49662 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CASP4P49662 RNA5SP346-201ENST00000363541 121 ntBASIC6.82□□□□□ -1.32
CASP4P49662 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.82□□□□□ -1.32
CASP4P49662 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.82□□□□□ -1.32
CASP4P49662 AC016908.1-201ENST00000442571 1219 ntBASIC6.82□□□□□ -1.32
CASP4P49662 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.82□□□□□ -1.32
CASP4P49662 RN7SL326P-201ENST00000477493 296 ntBASIC6.82□□□□□ -1.32
CASP4P49662 SNORA74.1-201ENST00000516320 180 ntBASIC6.82□□□□□ -1.32
CASP4P49662 AC092865.1-201ENST00000544395 1023 ntBASIC6.82□□□□□ -1.32
CASP4P49662 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CASP4P49662 AC011500.1-201ENST00000601963 469 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms