Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MED28P4-201ENST00000433137 572 ntBASIC5.68□□□□□ -1.5
CSNK1A1P48729 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AC018645.1-201ENST00000505003 109 ntBASIC5.68□□□□□ -1.5
CSNK1A1P48729 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AL049840.6-201ENST00000604583 345 ntBASIC5.68□□□□□ -1.5
CSNK1A1P48729 AL034374.2-201ENST00000605281 548 ntBASIC5.68□□□□□ -1.5
CSNK1A1P48729 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 AL352984.2-201ENST00000611153 546 ntBASIC5.68□□□□□ -1.5
CSNK1A1P48729 AP001885.1-201ENST00000621658 558 ntBASIC5.68□□□□□ -1.5
CSNK1A1P48729 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CSNK1A1P48729 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CSNK1A1P48729 NR1H5P-201ENST00000452683 1377 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 AC011369.2-201ENST00000624423 1567 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 AL353743.3-201ENST00000442109 1468 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 RNA5SP85-201ENST00000365378 119 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 UBE2V1P14-201ENST00000415815 558 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 RPL23AP18-201ENST00000416139 468 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 NME1P1-201ENST00000420914 382 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 OR6R1P-201ENST00000431838 940 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 AL133399.1-201ENST00000527476 298 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 AC009120.3-201ENST00000563335 499 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 MIR212-201ENST00000586026 110 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 MIR6885-201ENST00000612241 66 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 AC009120.7-201ENST00000623452 780 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 AL359976.1-201ENST00000418655 3528 ntBASIC5.67□□□□□ -1.5
CSNK1A1P48729 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.67□□□□□ -1.5
CSNK1A1P48729 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSNK1A1P48729 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC090220.1-201ENST00000593078 1699 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC079248.1-201ENST00000427568 1546 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC099654.3-201ENST00000447087 1546 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 RNA5SP485-201ENST00000365053 119 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 MIR551B-201ENST00000384984 96 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 VIM2P-201ENST00000402383 1294 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 RN7SKP129-201ENST00000410288 299 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 MRPS21P5-201ENST00000417885 231 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 RPS18P1-201ENST00000447840 458 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms