Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SLC6A4P31645 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SLC6A4P31645 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SLC6A4P31645 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SLC6A4P31645 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SLC6A4P31645 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SLC6A4P31645 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SLC6A4P31645 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SLC6A4P31645 RNU1-84P-201ENST00000365447 164 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SLC6A4P31645 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SLC6A4P31645 TRAV35-201ENST00000390462 330 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 RPL5P20-201ENST00000403848 896 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 AL359092.1-201ENST00000417156 265 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC073464.3-201ENST00000422564 712 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC013410.1-201ENST00000436223 1232 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC234771.2-201ENST00000445718 597 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 TVP23CP1-201ENST00000450317 639 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 RPL23AP64-201ENST00000469465 435 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 RPL29P23-201ENST00000486188 442 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.79□□□□□ -1.32
SLC6A4P31645 RPL5P14-201ENST00000494197 878 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AL117692.1-201ENST00000494283 713 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.79□□□□□ -1.32
SLC6A4P31645 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC104072.1-201ENST00000568817 668 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AL356986.1-201ENST00000604085 341 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AL157899.1-201ENST00000604110 936 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 WBP1LP12-201ENST00000604449 331 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC063944.3-201ENST00000609969 533 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 AC009269.6-201ENST00000621778 588 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AL450226.2-201ENST00000622913 439 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 AC097520.1-201ENST00000624435 385 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 MAPK10-383ENST00000642032 3390 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.79□□□□□ -1.32
SLC6A4P31645 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SLC6A4P31645 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SLC6A4P31645 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SLC6A4P31645 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.79□□□□□ -1.32
SLC6A4P31645 SALL4P7-201ENST00000555779 3120 ntBASIC6.79□□□□□ -1.32
SLC6A4P31645 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.78□□□□□ -1.32
SLC6A4P31645 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SLC6A4P31645 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SLC6A4P31645 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
SLC6A4P31645 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 AC068733.2-201ENST00000605434 1418 ntBASIC6.78□□□□□ -1.32
SLC6A4P31645 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.78□□□□□ -1.32
SLC6A4P31645 AC007998.4-201ENST00000612496 2533 ntBASIC6.78□□□□□ -1.32
SLC6A4P31645 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.78□□□□□ -1.32
SLC6A4P31645 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.78□□□□□ -1.32
SLC6A4P31645 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SLC6A4P31645 RN7SKP129-201ENST00000410288 299 ntBASIC6.78□□□□□ -1.32
SLC6A4P31645 AC096537.2-201ENST00000413707 714 ntBASIC6.78□□□□□ -1.32
SLC6A4P31645 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.78□□□□□ -1.32
SLC6A4P31645 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.78□□□□□ -1.32
SLC6A4P31645 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms