Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGA1P17096 AC007956.1-201ENST00000555623 542 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGA1P17096 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGA1P17096 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGA1P17096 AP005119.1-201ENST00000580956 292 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGA1P17096 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 SNX18P12-201ENST00000624821 759 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 AC129915.3-201ENST00000634128 948 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 PSG10P-201ENST00000501199 1500 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 BIN2P1-201ENST00000504996 1530 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGA1P17096 AC022905.1-201ENST00000503430 3048 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 AL731556.1-201ENST00000394628 3711 ntBASIC6.48□□□□□ -1.37
HMGA1P17096 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGA1P17096 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGA1P17096 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HMGA1P17096 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMGA1P17096 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGA1P17096 AC127024.8-201ENST00000623719 2094 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMGA1P17096 RNFT1P3-201ENST00000340898 1052 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 FAM32BP-201ENST00000344033 333 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 RNA5SP273-201ENST00000362484 113 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 SUGT1P2-201ENST00000379452 992 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 AL132875.1-201ENST00000403623 949 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 RNA5SP156-201ENST00000410250 110 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 HMGN1P20-201ENST00000411849 300 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 AC245096.1-201ENST00000413104 546 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGA1P17096 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGA1P17096 RPL35AP31-201ENST00000418340 337 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 IPPKP1-201ENST00000422501 768 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGA1P17096 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGA1P17096 CFL1P4-201ENST00000451536 498 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 HLA-DPA3-207ENST00000454398 229 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGA1P17096 OR5H7P-201ENST00000514084 930 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGA1P17096 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGA1P17096 AC092865.1-201ENST00000544395 1023 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGA1P17096 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGA1P17096 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGA1P17096 AC027243.2-201ENST00000602530 724 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 AC008555.7-201ENST00000605008 583 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGA1P17096 OR7A1P-202ENST00000641542 1158 ntBASIC6.47□□□□□ -1.37
HMGA1P17096 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMGA1P17096 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMGA1P17096 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGA1P17096 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMGA1P17096 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGA1P17096 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGA1P17096 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGA1P17096 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.46□□□□□ -1.37
HMGA1P17096 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
HMGA1P17096 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMGA1P17096 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.37
HMGA1P17096 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMGA1P17096 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC6.46□□□□□ -1.37
HMGA1P17096 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.46□□□□□ -1.37
HMGA1P17096 AC006213.6-201ENST00000623722 4179 ntBASIC6.46□□□□□ -1.37
HMGA1P17096 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.46□□□□□ -1.37
HMGA1P17096 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
HMGA1P17096 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGA1P17096 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGA1P17096 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGA1P17096 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGA1P17096 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGA1P17096 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HMGA1P17096 AC008171.1-201ENST00000395058 200 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGA1P17096 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGA1P17096 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGA1P17096 SLC20A1P1-201ENST00000413906 956 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGA1P17096 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGA1P17096 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGA1P17096 NAP1L4P2-201ENST00000425958 899 ntBASIC6.46□□□□□ -1.38
HMGA1P17096 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms