Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
KRT3P12035 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.67□□□□□ -1.34
KRT3P12035 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.67□□□□□ -1.34
KRT3P12035 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.67□□□□□ -1.34
KRT3P12035 RNA5SP115-201ENST00000411160 107 ntBASIC6.67□□□□□ -1.34
KRT3P12035 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.67□□□□□ -1.34
KRT3P12035 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.67□□□□□ -1.34
KRT3P12035 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.67□□□□□ -1.34
KRT3P12035 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.67□□□□□ -1.34
KRT3P12035 GAPDHP19-201ENST00000431768 1005 ntBASIC6.67□□□□□ -1.34
KRT3P12035 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.67□□□□□ -1.34
KRT3P12035 OR13K1P-201ENST00000444577 975 ntBASIC6.67□□□□□ -1.34
KRT3P12035 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.67□□□□□ -1.34
KRT3P12035 VPS25P1-201ENST00000455691 508 ntBASIC6.67□□□□□ -1.34
KRT3P12035 RN7SL165P-201ENST00000477476 291 ntBASIC6.67□□□□□ -1.34
KRT3P12035 AC090142.2-201ENST00000483263 416 ntBASIC6.67□□□□□ -1.34
KRT3P12035 RN7SL714P-201ENST00000487050 298 ntBASIC6.67□□□□□ -1.34
KRT3P12035 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.67□□□□□ -1.34
KRT3P12035 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.67□□□□□ -1.34
KRT3P12035 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.67□□□□□ -1.34
KRT3P12035 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.67□□□□□ -1.34
KRT3P12035 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.67□□□□□ -1.34
KRT3P12035 AC025283.1-201ENST00000572039 734 ntBASIC6.67□□□□□ -1.34
KRT3P12035 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.67□□□□□ -1.34
KRT3P12035 RN7SL66P-201ENST00000582099 264 ntBASIC6.67□□□□□ -1.34
KRT3P12035 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.67□□□□□ -1.34
KRT3P12035 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.67□□□□□ -1.34
KRT3P12035 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.67□□□□□ -1.34
KRT3P12035 AC097641.3-201ENST00000613523 464 ntBASIC6.67□□□□□ -1.34
KRT3P12035 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 AC005899.6-201ENST00000620729 297 ntBASIC6.67□□□□□ -1.34
KRT3P12035 AC063952.1-203ENST00000634410 658 ntBASIC6.67□□□□□ -1.34
KRT3P12035 AC022726.2-201ENST00000634673 547 ntBASIC6.67□□□□□ -1.34
KRT3P12035 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.67□□□□□ -1.34
KRT3P12035 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.67□□□□□ -1.34
KRT3P12035 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.67□□□□□ -1.34
KRT3P12035 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRT3P12035 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
KRT3P12035 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.66□□□□□ -1.34
KRT3P12035 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRT3P12035 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRT3P12035 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
KRT3P12035 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRT3P12035 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.66□□□□□ -1.34
KRT3P12035 RNA5SP485-201ENST00000365053 119 ntBASIC6.66□□□□□ -1.34
KRT3P12035 RN7SKP129-201ENST00000410288 299 ntBASIC6.66□□□□□ -1.34
KRT3P12035 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRT3P12035 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.66□□□□□ -1.34
KRT3P12035 GTF2IP14-201ENST00000441415 586 ntBASIC6.66□□□□□ -1.34
KRT3P12035 AC114982.2-201ENST00000461396 358 ntBASIC6.66□□□□□ -1.34
KRT3P12035 AC010343.2-201ENST00000510162 224 ntBASIC6.66□□□□□ -1.34
KRT3P12035 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.66□□□□□ -1.34
KRT3P12035 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
KRT3P12035 IGHV4-55-201ENST00000520889 368 ntBASIC6.66□□□□□ -1.34
KRT3P12035 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.66□□□□□ -1.34
KRT3P12035 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 AC008055.1-201ENST00000547032 609 ntBASIC6.66□□□□□ -1.34
KRT3P12035 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 AC009729.1-201ENST00000548873 1133 ntBASIC6.66□□□□□ -1.34
KRT3P12035 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.66□□□□□ -1.34
KRT3P12035 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 AC005332.4-201ENST00000592752 579 ntBASIC6.66□□□□□ -1.34
KRT3P12035 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 GAPDHP41-201ENST00000613707 975 ntBASIC6.66□□□□□ -1.34
KRT3P12035 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.66□□□□□ -1.34
KRT3P12035 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.66□□□□□ -1.34
KRT3P12035 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
KRT3P12035 AL117378.2-201ENST00000622916 1337 ntBASIC6.66□□□□□ -1.34
KRT3P12035 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRT3P12035 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRT3P12035 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.66□□□□□ -1.34
KRT3P12035 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
KRT3P12035 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.66□□□□□ -1.34
KRT3P12035 ZNF969P-201ENST00000510345 2341 ntBASIC6.66□□□□□ -1.34
KRT3P12035 AL136984.1-201ENST00000607611 1893 ntBASIC6.66□□□□□ -1.34
KRT3P12035 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.66□□□□□ -1.34
KRT3P12035 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.66□□□□□ -1.34
KRT3P12035 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.66□□□□□ -1.34
KRT3P12035 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.66□□□□□ -1.34
KRT3P12035 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
KRT3P12035 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRT3P12035 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
KRT3P12035 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
KRT3P12035 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.65□□□□□ -1.34
KRT3P12035 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRT3P12035 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
KRT3P12035 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.65□□□□□ -1.34
KRT3P12035 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms