Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AL133260.1-201ENST00000405720 405 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AL451046.1-201ENST00000406097 534 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC007562.1-201ENST00000421819 517 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 GPN3P1-201ENST00000423883 535 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC023274.2-201ENST00000445264 521 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 NPIPB1P-202ENST00000588786 828 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC138473.1-201ENST00000605717 526 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC006924.1-201ENST00000610750 559 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC021766.1-201ENST00000624404 741 ntBASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TCRBV5S1A1TA0A578 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC096921.2-201ENST00000561507 1916 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AP001541.1-201ENST00000623322 1904 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 LCN1P2-201ENST00000372030 223 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 MIR433-201ENST00000384837 93 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 RN7SKP121-201ENST00000410842 305 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 GAPDHP19-201ENST00000431768 1005 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC112492.2-201ENST00000432774 1030 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 CYCSP53-201ENST00000455540 265 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 VPS25P1-201ENST00000455691 508 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC010343.2-201ENST00000510162 224 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 RPA2P3-201ENST00000533268 770 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AP001858.2-201ENST00000536213 601 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC124891.1-201ENST00000536322 519 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AP000919.1-201ENST00000582850 985 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC010998.3-201ENST00000613871 631 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC253576.2-201ENST00000618815 580 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AC089999.3-201ENST00000622440 577 ntBASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TCRBV5S1A1TA0A578 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
TCRBV5S1A1TA0A578 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TCRBV5S1A1TA0A578 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TCRBV5S1A1TA0A578 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TCRBV5S1A1TA0A578 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TCRBV5S1A1TA0A578 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms