Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA11Q9Y5H2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 GPX1P1-201ENST00000388829 606 ntBASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 SLC29A4P1-201ENST00000398760 971 ntBASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 MIPEPP3-201ENST00000412105 444 ntBASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 NCF1B-203ENST00000435988 1254 ntBASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 AC092666.2-201ENST00000613287 246 ntBASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA11Q9Y5H2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 AC116562.4-201ENST00000641316 2276 ntBASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA11Q9Y5H2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 AC098818.2-201ENST00000564925 2320 ntBASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 AC009237.14-201ENST00000609975 1594 ntBASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA11Q9Y5H2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.14■□□□□ 0.66
PCDHGA11Q9Y5H2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA11Q9Y5H2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA11Q9Y5H2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA11Q9Y5H2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
PCDHGA11Q9Y5H2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 AC092118.2-201ENST00000613495 667 ntBASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA11Q9Y5H2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms