Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 SOX15-203ENST00000570788 1093 ntBASIC19.88■□□□□ 0.77
PKP3Q9Y446 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
PKP3Q9Y446 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP3Q9Y446 PHGDH-210ENST00000641115 1638 ntBASIC19.87■□□□□ 0.77
PKP3Q9Y446 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP3Q9Y446 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP3Q9Y446 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.87■□□□□ 0.77
PKP3Q9Y446 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP3Q9Y446 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKP3Q9Y446 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP3Q9Y446 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKP3Q9Y446 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PKP3Q9Y446 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.87■□□□□ 0.77
PKP3Q9Y446 UNC93B5-201ENST00000530315 699 ntBASIC19.87■□□□□ 0.77
PKP3Q9Y446 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.87■□□□□ 0.77
PKP3Q9Y446 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.87■□□□□ 0.77
PKP3Q9Y446 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP3Q9Y446 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKP3Q9Y446 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.86■□□□□ 0.77
PKP3Q9Y446 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PKP3Q9Y446 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.86■□□□□ 0.77
PKP3Q9Y446 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP3Q9Y446 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP3Q9Y446 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.86■□□□□ 0.77
PKP3Q9Y446 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.86■□□□□ 0.77
PKP3Q9Y446 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PKP3Q9Y446 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.86■□□□□ 0.77
PKP3Q9Y446 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PKP3Q9Y446 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PKP3Q9Y446 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP3Q9Y446 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP3Q9Y446 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP3Q9Y446 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PKP3Q9Y446 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 UNC93B4-201ENST00000505679 747 ntBASIC19.85■□□□□ 0.77
PKP3Q9Y446 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP3Q9Y446 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.85■□□□□ 0.77
PKP3Q9Y446 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.84■□□□□ 0.77
PKP3Q9Y446 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 AP001271.2-201ENST00000624018 1556 ntBASIC19.84■□□□□ 0.77
PKP3Q9Y446 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.84■□□□□ 0.77
PKP3Q9Y446 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.84■□□□□ 0.77
PKP3Q9Y446 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.84■□□□□ 0.77
PKP3Q9Y446 RPS2P52-201ENST00000469610 820 ntBASIC19.84■□□□□ 0.77
PKP3Q9Y446 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms