Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.59■□□□□ 0.41
LSM2Q9Y333 AC105265.2-201ENST00000467189 838 ntBASIC17.59■□□□□ 0.41
LSM2Q9Y333 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.59■□□□□ 0.41
LSM2Q9Y333 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LSM2Q9Y333 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 AC135050.7-201ENST00000624508 2218 ntBASIC17.59■□□□□ 0.41
LSM2Q9Y333 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM2Q9Y333 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.59■□□□□ 0.41
LSM2Q9Y333 AC006333.2-201ENST00000607957 2099 ntBASIC17.59■□□□□ 0.41
LSM2Q9Y333 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM2Q9Y333 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
LSM2Q9Y333 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LSM2Q9Y333 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM2Q9Y333 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.58■□□□□ 0.41
LSM2Q9Y333 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LSM2Q9Y333 AC087633.2-202ENST00000565166 1439 ntBASIC17.58■□□□□ 0.41
LSM2Q9Y333 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM2Q9Y333 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.58■□□□□ 0.4
LSM2Q9Y333 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
LSM2Q9Y333 IRS3P-201ENST00000223076 1006 ntBASIC17.58■□□□□ 0.4
LSM2Q9Y333 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.58■□□□□ 0.4
LSM2Q9Y333 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.58■□□□□ 0.4
LSM2Q9Y333 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.58■□□□□ 0.4
LSM2Q9Y333 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
LSM2Q9Y333 CCDC92B-201ENST00000575506 885 ntBASIC17.58■□□□□ 0.4
LSM2Q9Y333 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.58■□□□□ 0.4
LSM2Q9Y333 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.58■□□□□ 0.4
LSM2Q9Y333 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.58■□□□□ 0.4
LSM2Q9Y333 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSM2Q9Y333 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 KRT8P17-201ENST00000453110 1448 ntBASIC17.57■□□□□ 0.4
LSM2Q9Y333 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 AL390961.4-201ENST00000623958 2535 ntBASIC17.57■□□□□ 0.4
LSM2Q9Y333 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 RASA4CP-201ENST00000424092 1398 ntBASIC17.57■□□□□ 0.4
LSM2Q9Y333 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSM2Q9Y333 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.57■□□□□ 0.4
LSM2Q9Y333 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 PGM5P4-201ENST00000421970 445 ntBASIC17.56■□□□□ 0.4
LSM2Q9Y333 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 AP001160.3-201ENST00000601484 763 ntBASIC17.56■□□□□ 0.4
LSM2Q9Y333 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LSM2Q9Y333 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM2Q9Y333 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.55■□□□□ 0.4
LSM2Q9Y333 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.55■□□□□ 0.4
LSM2Q9Y333 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms