Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 KRT18P68-201ENST00000392293 1000 ntBASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP2BQ9UQN3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 AL355472.2-201ENST00000422958 438 ntBASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 CYP2T1P-201ENST00000432607 1285 ntBASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP2BQ9UQN3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP2BQ9UQN3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP2BQ9UQN3 CYP2T3P-201ENST00000601990 817 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms