Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPH3ALQ9UNE2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 AC004408.2-201ENST00000623613 2777 ntBASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 DPP3P2-201ENST00000416030 1696 ntBASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 AC027682.1-201ENST00000562846 899 ntBASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3ALQ9UNE2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 POU5F1P4-201ENST00000413175 1085 ntBASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 MIR2861-201ENST00000636310 90 ntBASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3ALQ9UNE2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 AC120498.10-201ENST00000621827 505 ntBASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 RARRES2P11-201ENST00000635158 484 ntBASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.4■□□□□ 0.06
RPH3ALQ9UNE2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3ALQ9UNE2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RPH3ALQ9UNE2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3ALQ9UNE2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.39■□□□□ 0.05
RPH3ALQ9UNE2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms