Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA1Q9UND3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.27■□□□□ 0.52
NPIPA1Q9UND3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA1Q9UND3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.27■□□□□ 0.52
NPIPA1Q9UND3 MIR2861-201ENST00000636310 90 ntBASIC18.27■□□□□ 0.52
NPIPA1Q9UND3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA1Q9UND3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA1Q9UND3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPA1Q9UND3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPA1Q9UND3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
NPIPA1Q9UND3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.27■□□□□ 0.51
NPIPA1Q9UND3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 AC092720.2-201ENST00000602388 1665 ntBASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 RPS2P55-201ENST00000397318 883 ntBASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 AC107956.1-201ENST00000494359 873 ntBASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
NPIPA1Q9UND3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 AL121603.2-201ENST00000557373 2117 ntBASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 AC012618.2-201ENST00000428058 849 ntBASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 PRKY-204ENST00000533551 1019 ntBASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 AC233702.5-201ENST00000584107 538 ntBASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NPIPA1Q9UND3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA1Q9UND3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 TSPY7P-201ENST00000431358 1114 ntBASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 AC073912.3-201ENST00000624414 853 ntBASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms