Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHA4Q9UN74 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHA4Q9UN74 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
PCDHA4Q9UN74 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHA4Q9UN74 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHA4Q9UN74 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PCDHA4Q9UN74 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 AC006058.3-201ENST00000606217 1069 ntBASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA4Q9UN74 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA4Q9UN74 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA4Q9UN74 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA4Q9UN74 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.64■■□□□ 1.22
PCDHA4Q9UN74 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA4Q9UN74 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA4Q9UN74 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA4Q9UN74 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 AC073648.6-201ENST00000641589 218 ntBASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA4Q9UN74 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 AC128676.1-201ENST00000454392 318 ntBASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 FAM201B-201ENST00000458407 597 ntBASIC22.62■■□□□ 1.21
PCDHA4Q9UN74 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms