Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 UNC93B4-201ENST00000505679 747 ntBASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 AC008403.3-201ENST00000598924 454 ntBASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 AP003097.1-201ENST00000530657 1135 ntBASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CUEDC1Q9NWM3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.14■□□□□ 0.66
CUEDC1Q9NWM3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CUEDC1Q9NWM3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 AC026366.1-201ENST00000488803 879 ntBASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 AC120498.8-201ENST00000614275 531 ntBASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CUEDC1Q9NWM3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms