Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 MTDHP1-201ENST00000605323 784 ntBASIC20.44■□□□□ 0.86
VPS45Q9NRW7 AC124016.1-201ENST00000609552 612 ntBASIC20.44■□□□□ 0.86
VPS45Q9NRW7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS45Q9NRW7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 SMG8-203ENST00000578922 2178 ntBASIC20.43■□□□□ 0.86
VPS45Q9NRW7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS45Q9NRW7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 AC239809.2-201ENST00000415381 517 ntBASIC20.42■□□□□ 0.86
VPS45Q9NRW7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.42■□□□□ 0.86
VPS45Q9NRW7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS45Q9NRW7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 RCN1P1-201ENST00000400413 996 ntBASIC20.41■□□□□ 0.86
VPS45Q9NRW7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 AC012306.2-201ENST00000609350 630 ntBASIC20.41■□□□□ 0.86
VPS45Q9NRW7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 AL023875.1-201ENST00000640777 796 ntBASIC20.41■□□□□ 0.86
VPS45Q9NRW7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS45Q9NRW7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS45Q9NRW7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms