Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.21■□□□□ 0.51
UBQLN4Q9NRR5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
UBQLN4Q9NRR5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 RPS2P52-201ENST00000469610 820 ntBASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 UNC93B5-201ENST00000530315 699 ntBASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 SOX15-203ENST00000570788 1093 ntBASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 AC120498.8-201ENST00000614275 531 ntBASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 AC116351.2-201ENST00000606540 1585 ntBASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 AC018553.1-201ENST00000616682 1458 ntBASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN4Q9NRR5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 UNC93B4-201ENST00000505679 747 ntBASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 RNA5SP413-201ENST00000516373 109 ntBASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN4Q9NRR5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 AFG3L1P-217ENST00000557444 2447 ntBASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN4Q9NRR5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms