Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 MCRIP2P1-201ENST00000394346 511 ntBASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 AC016405.3-201ENST00000607710 860 ntBASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 AC100791.3-201ENST00000617619 330 ntBASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 AC013268.1-206ENST00000638368 961 ntBASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 AC112229.1-201ENST00000639295 961 ntBASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42SE2Q9NRR3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 AL032819.2-201ENST00000624543 2162 ntBASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE2Q9NRR3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 HLA-G-202ENST00000376815 851 ntBASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 HLA-G-203ENST00000376818 1127 ntBASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CDC42SE2Q9NRR3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms