Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 MIR4651-201ENST00000582622 73 ntBASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 AC060766.5-201ENST00000590539 871 ntBASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.94■□□□□ 0.62
NECTIN3Q9NQS3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 AC092720.2-201ENST00000602388 1665 ntBASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 AC092368.3-202ENST00000574180 1591 ntBASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.93■□□□□ 0.62
NECTIN3Q9NQS3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 PNMA6B-201ENST00000538162 1200 ntBASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.92■□□□□ 0.62
NECTIN3Q9NQS3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NECTIN3Q9NQS3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms