Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HPS4Q9NQG7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 AC005229.4-201ENST00000610085 2198 ntBASIC20.49■□□□□ 0.87
HPS4Q9NQG7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 RBM17P1-201ENST00000453646 1190 ntBASIC20.49■□□□□ 0.87
HPS4Q9NQG7 AP002982.1-201ENST00000492365 877 ntBASIC20.49■□□□□ 0.87
HPS4Q9NQG7 NUDT16P1-203ENST00000513809 620 ntBASIC20.49■□□□□ 0.87
HPS4Q9NQG7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HPS4Q9NQG7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 REXO1L10P-201ENST00000615707 1290 ntBASIC20.48■□□□□ 0.87
HPS4Q9NQG7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 AC079598.2-202ENST00000546624 1451 ntBASIC20.48■□□□□ 0.87
HPS4Q9NQG7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.48■□□□□ 0.87
HPS4Q9NQG7 AF106564.1-201ENST00000607058 2553 ntBASIC20.47■□□□□ 0.87
HPS4Q9NQG7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS4Q9NQG7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 KRT8P17-201ENST00000453110 1448 ntBASIC20.46■□□□□ 0.87
HPS4Q9NQG7 KRT8P9-201ENST00000558927 1449 ntBASIC20.46■□□□□ 0.87
HPS4Q9NQG7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HPS4Q9NQG7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms