Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.66■□□□□ 0.74
SSU72Q9NP77 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.66■□□□□ 0.74
SSU72Q9NP77 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSU72Q9NP77 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 AC008406.3-201ENST00000620001 1374 ntBASIC19.65■□□□□ 0.74
SSU72Q9NP77 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSU72Q9NP77 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
SSU72Q9NP77 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSU72Q9NP77 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSU72Q9NP77 AC005082.1-201ENST00000413042 2259 ntBASIC19.64■□□□□ 0.74
SSU72Q9NP77 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.64■□□□□ 0.74
SSU72Q9NP77 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.64■□□□□ 0.74
SSU72Q9NP77 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSU72Q9NP77 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSU72Q9NP77 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSU72Q9NP77 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSU72Q9NP77 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSU72Q9NP77 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.64■□□□□ 0.73
SSU72Q9NP77 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SSU72Q9NP77 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SSU72Q9NP77 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.63■□□□□ 0.73
SSU72Q9NP77 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SSU72Q9NP77 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 PHGDH-210ENST00000641115 1638 ntBASIC19.63■□□□□ 0.73
SSU72Q9NP77 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.63■□□□□ 0.73
SSU72Q9NP77 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.63■□□□□ 0.73
SSU72Q9NP77 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.63■□□□□ 0.73
SSU72Q9NP77 TERF1P2-201ENST00000583350 1212 ntBASIC19.63■□□□□ 0.73
SSU72Q9NP77 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSU72Q9NP77 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SSU72Q9NP77 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSU72Q9NP77 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSU72Q9NP77 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SSU72Q9NP77 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSU72Q9NP77 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SSU72Q9NP77 AC123595.1-201ENST00000440769 1046 ntBASIC19.62■□□□□ 0.73
SSU72Q9NP77 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.62■□□□□ 0.73
SSU72Q9NP77 AL162412.1-201ENST00000567129 965 ntBASIC19.62■□□□□ 0.73
SSU72Q9NP77 AL591742.1-201ENST00000604433 565 ntBASIC19.62■□□□□ 0.73
SSU72Q9NP77 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSU72Q9NP77 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSU72Q9NP77 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SSU72Q9NP77 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.62■□□□□ 0.73
SSU72Q9NP77 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSU72Q9NP77 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSU72Q9NP77 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSU72Q9NP77 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms