Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 CD99P1-205ENST00000527459 561 ntBASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 AC007952.6-201ENST00000573168 2673 ntBASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 AC003957.1-201ENST00000625108 2673 ntBASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 TREX1-205ENST00000625293 1783 ntBASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 AC105036.2-201ENST00000569468 176 ntBASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEUROD4Q9HD90 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 AL050303.2-201ENST00000619798 666 ntBASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEUROD4Q9HD90 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
NEUROD4Q9HD90 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.64■□□□□ 0.58
NEUROD4Q9HD90 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
NEUROD4Q9HD90 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEUROD4Q9HD90 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEUROD4Q9HD90 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms