Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 AC008040.2-201ENST00000461049 708 ntBASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 TFP1-202ENST00000475455 1573 ntBASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 AC121338.2-201ENST00000622535 1744 ntBASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 HOMER2P1-201ENST00000455653 964 ntBASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
ZFYVE28Q9HCC9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.71■■□□□ 1.23
ZFYVE28Q9HCC9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZFYVE28Q9HCC9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
ZFYVE28Q9HCC9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
ZFYVE28Q9HCC9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
ZFYVE28Q9HCC9 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.71■■□□□ 1.23
ZFYVE28Q9HCC9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZFYVE28Q9HCC9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
ZFYVE28Q9HCC9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
ZFYVE28Q9HCC9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 AL512604.3-201ENST00000569583 964 ntBASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZFYVE28Q9HCC9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 HCG4P8-203ENST00000443049 980 ntBASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE28Q9HCC9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 AC092338.2-201ENST00000568827 1415 ntBASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 AL671277.2-201ENST00000458060 996 ntBASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE28Q9HCC9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 TSPY17P-201ENST00000450329 467 ntBASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 AC140113.3-201ENST00000605663 199 ntBASIC22.67■■□□□ 1.22
ZFYVE28Q9HCC9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms