Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRTM1Q9HBL6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 AL512625.2-201ENST00000417533 625 ntBASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 AC023632.3-201ENST00000521633 145 ntBASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 AC005181.1-201ENST00000604782 1256 ntBASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRTM1Q9HBL6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRTM1Q9HBL6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRTM1Q9HBL6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRTM1Q9HBL6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRTM1Q9HBL6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 AC022517.1-201ENST00000592429 346 ntBASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRTM1Q9HBL6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19■□□□□ 0.63
LRTM1Q9HBL6 PHGDH-210ENST00000641115 1638 ntBASIC19■□□□□ 0.63
LRTM1Q9HBL6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19■□□□□ 0.63
LRTM1Q9HBL6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19■□□□□ 0.63
LRTM1Q9HBL6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19■□□□□ 0.63
LRTM1Q9HBL6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19■□□□□ 0.63
LRTM1Q9HBL6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19■□□□□ 0.63
LRTM1Q9HBL6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LRTM1Q9HBL6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRTM1Q9HBL6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19■□□□□ 0.63
LRTM1Q9HBL6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 AC004911.1-201ENST00000416316 871 ntBASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 AC018445.3-201ENST00000624177 1945 ntBASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRTM1Q9HBL6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRTM1Q9HBL6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms