Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PHACTR1Q9C0D0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 KRT18P68-201ENST00000392293 1000 ntBASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHACTR1Q9C0D0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHACTR1Q9C0D0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHACTR1Q9C0D0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 AC004408.2-201ENST00000623613 2777 ntBASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 NTF6G-201ENST00000591094 616 ntBASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 CYP2T3P-201ENST00000601990 817 ntBASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHACTR1Q9C0D0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.02■□□□□ 0.8
PHACTR1Q9C0D0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms