Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21■□□□□ 0.95
TRIM7Q9C029 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRIM7Q9C029 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM7Q9C029 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21■□□□□ 0.95
TRIM7Q9C029 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21■□□□□ 0.95
TRIM7Q9C029 AF201337.1-201ENST00000520239 748 ntBASIC21■□□□□ 0.95
TRIM7Q9C029 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM7Q9C029 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21■□□□□ 0.95
TRIM7Q9C029 AL031963.3-201ENST00000606441 850 ntBASIC21■□□□□ 0.95
TRIM7Q9C029 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21■□□□□ 0.95
TRIM7Q9C029 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM7Q9C029 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TRIM7Q9C029 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM7Q9C029 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM7Q9C029 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM7Q9C029 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM7Q9C029 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM7Q9C029 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM7Q9C029 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM7Q9C029 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM7Q9C029 MKRN4P-201ENST00000444706 1521 ntBASIC20.99■□□□□ 0.95
TRIM7Q9C029 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM7Q9C029 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM7Q9C029 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM7Q9C029 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM7Q9C029 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRIM7Q9C029 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 BX276092.2-201ENST00000417668 665 ntBASIC20.98■□□□□ 0.95
TRIM7Q9C029 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM7Q9C029 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM7Q9C029 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.98■□□□□ 0.95
TRIM7Q9C029 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM7Q9C029 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM7Q9C029 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRIM7Q9C029 TMEM179-206ENST00000616017 1645 ntBASIC20.97■□□□□ 0.95
TRIM7Q9C029 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM7Q9C029 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM7Q9C029 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM7Q9C029 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM7Q9C029 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM7Q9C029 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM7Q9C029 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM7Q9C029 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM7Q9C029 LSM12P1-201ENST00000411836 588 ntBASIC20.96■□□□□ 0.95
TRIM7Q9C029 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM7Q9C029 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM7Q9C029 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM7Q9C029 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM7Q9C029 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRIM7Q9C029 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.96■□□□□ 0.95
TRIM7Q9C029 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM7Q9C029 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.95■□□□□ 0.95
TRIM7Q9C029 KRT8P20-201ENST00000423953 1409 ntBASIC20.95■□□□□ 0.95
TRIM7Q9C029 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM7Q9C029 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 GUSBP6-202ENST00000438529 1198 ntBASIC20.95■□□□□ 0.94
TRIM7Q9C029 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM7Q9C029 AC083906.2-201ENST00000511578 360 ntBASIC20.95■□□□□ 0.94
TRIM7Q9C029 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM7Q9C029 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.95■□□□□ 0.94
TRIM7Q9C029 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms