Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 PGM5P4-201ENST00000421970 445 ntBASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 AC123595.1-201ENST00000440769 1046 ntBASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 AC005082.1-201ENST00000413042 2259 ntBASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 AL049812.1-201ENST00000432563 2267 ntBASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-1Q9BYR8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
KRTAP3-1Q9BYR8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 AP001271.2-201ENST00000624018 1556 ntBASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 UQCRFS1P1-201ENST00000435169 820 ntBASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 AC142381.2-201ENST00000566120 298 ntBASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 AC104581.1-202ENST00000635932 2618 ntBASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP3-1Q9BYR8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms