Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 AC006557.6-201ENST00000623071 864 ntBASIC13.75□□□□□ -0.21
UPK3BQ9BT76 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 UBE2SP1-201ENST00000450587 669 ntBASIC13.74□□□□□ -0.21
UPK3BQ9BT76 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 AC066615.1-201ENST00000640911 628 ntBASIC13.74□□□□□ -0.21
UPK3BQ9BT76 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UPK3BQ9BT76 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 KRT8P20-201ENST00000423953 1409 ntBASIC13.73□□□□□ -0.21
UPK3BQ9BT76 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 AL031963.3-201ENST00000606441 850 ntBASIC13.73□□□□□ -0.21
UPK3BQ9BT76 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 AL359736.2-201ENST00000621992 437 ntBASIC13.73□□□□□ -0.21
UPK3BQ9BT76 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK3BQ9BT76 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK3BQ9BT76 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms