Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK1Q99986 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK1Q99986 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK1Q99986 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK1Q99986 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VRK1Q99986 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VRK1Q99986 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VRK1Q99986 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.41■□□□□ 0.38
VRK1Q99986 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
VRK1Q99986 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 UNC93B5-201ENST00000530315 699 ntBASIC17.41■□□□□ 0.38
VRK1Q99986 AP003097.1-201ENST00000530657 1135 ntBASIC17.41■□□□□ 0.38
VRK1Q99986 AC060766.5-201ENST00000590539 871 ntBASIC17.41■□□□□ 0.38
VRK1Q99986 AC008687.6-201ENST00000596318 630 ntBASIC17.41■□□□□ 0.38
VRK1Q99986 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 AC066615.1-201ENST00000640911 628 ntBASIC17.41■□□□□ 0.38
VRK1Q99986 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK1Q99986 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK1Q99986 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK1Q99986 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK1Q99986 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VRK1Q99986 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VRK1Q99986 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK1Q99986 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK1Q99986 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 AC092368.3-202ENST00000574180 1591 ntBASIC17.4■□□□□ 0.38
VRK1Q99986 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.4■□□□□ 0.38
VRK1Q99986 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VRK1Q99986 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.4■□□□□ 0.38
VRK1Q99986 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VRK1Q99986 AC026366.1-201ENST00000488803 879 ntBASIC17.4■□□□□ 0.38
VRK1Q99986 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 HLA-B-256ENST00000639848 1089 ntBASIC17.4■□□□□ 0.38
VRK1Q99986 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 AC018445.3-201ENST00000624177 1945 ntBASIC17.4■□□□□ 0.38
VRK1Q99986 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 SMG8-203ENST00000578922 2178 ntBASIC17.4■□□□□ 0.38
VRK1Q99986 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK1Q99986 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK1Q99986 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VRK1Q99986 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.39■□□□□ 0.37
VRK1Q99986 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.39■□□□□ 0.37
VRK1Q99986 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.39■□□□□ 0.37
VRK1Q99986 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.39■□□□□ 0.37
VRK1Q99986 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.39■□□□□ 0.37
VRK1Q99986 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
VRK1Q99986 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK1Q99986 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.38■□□□□ 0.37
VRK1Q99986 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms