Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PHOX2BQ99453 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHOX2BQ99453 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 AP005242.2-201ENST00000580065 1175 ntBASIC20.03■□□□□ 0.8
PHOX2BQ99453 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.03■□□□□ 0.8
PHOX2BQ99453 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHOX2BQ99453 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHOX2BQ99453 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHOX2BQ99453 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHOX2BQ99453 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHOX2BQ99453 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHOX2BQ99453 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 AL671277.2-201ENST00000458060 996 ntBASIC20.02■□□□□ 0.8
PHOX2BQ99453 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 COX11P1-201ENST00000489116 835 ntBASIC20.02■□□□□ 0.8
PHOX2BQ99453 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHOX2BQ99453 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHOX2BQ99453 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHOX2BQ99453 AC139530.1-201ENST00000575312 1977 ntBASIC20.02■□□□□ 0.8
PHOX2BQ99453 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PHOX2BQ99453 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHOX2BQ99453 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHOX2BQ99453 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHOX2BQ99453 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHOX2BQ99453 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHOX2BQ99453 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHOX2BQ99453 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHOX2BQ99453 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHOX2BQ99453 HMGA1P5-201ENST00000412453 271 ntBASIC20.01■□□□□ 0.79
PHOX2BQ99453 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 AL359075.1-203ENST00000462729 1002 ntBASIC20.01■□□□□ 0.79
PHOX2BQ99453 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHOX2BQ99453 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHOX2BQ99453 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PHOX2BQ99453 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PHOX2BQ99453 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20■□□□□ 0.79
PHOX2BQ99453 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20■□□□□ 0.79
PHOX2BQ99453 KRT17P6-201ENST00000453795 1220 ntBASIC20■□□□□ 0.79
PHOX2BQ99453 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20■□□□□ 0.79
PHOX2BQ99453 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20■□□□□ 0.79
PHOX2BQ99453 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20■□□□□ 0.79
PHOX2BQ99453 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20■□□□□ 0.79
PHOX2BQ99453 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PHOX2BQ99453 AC130371.2-201ENST00000619443 611 ntBASIC20■□□□□ 0.79
PHOX2BQ99453 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20■□□□□ 0.79
PHOX2BQ99453 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20■□□□□ 0.79
PHOX2BQ99453 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHOX2BQ99453 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms