Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
YME1L1Q96TA2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
YME1L1Q96TA2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
YME1L1Q96TA2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
YME1L1Q96TA2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.3■■□□□ 1
YME1L1Q96TA2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
YME1L1Q96TA2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.3■■□□□ 1
YME1L1Q96TA2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 BX664615.1-201ENST00000443558 458 ntBASIC21.3■■□□□ 1
YME1L1Q96TA2 YBX1P10-201ENST00000444752 975 ntBASIC21.3■■□□□ 1
YME1L1Q96TA2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
YME1L1Q96TA2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.3■■□□□ 1
YME1L1Q96TA2 LINC01238-205ENST00000567549 1107 ntBASIC21.3■■□□□ 1
YME1L1Q96TA2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.3■■□□□ 1
YME1L1Q96TA2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
YME1L1Q96TA2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
YME1L1Q96TA2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YME1L1Q96TA2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
YME1L1Q96TA2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.29■■□□□ 1
YME1L1Q96TA2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YME1L1Q96TA2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.29■■□□□ 1
YME1L1Q96TA2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
YME1L1Q96TA2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
YME1L1Q96TA2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
YME1L1Q96TA2 TUBB8P6-201ENST00000436895 1288 ntBASIC21.29■■□□□ 1
YME1L1Q96TA2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.29■■□□□ 1
YME1L1Q96TA2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
YME1L1Q96TA2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.29■■□□□ 1
YME1L1Q96TA2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.29■■□□□ 1
YME1L1Q96TA2 SLC25A1P4-201ENST00000567977 778 ntBASIC21.29■■□□□ 1
YME1L1Q96TA2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YME1L1Q96TA2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YME1L1Q96TA2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.29■■□□□ 1
YME1L1Q96TA2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YME1L1Q96TA2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
YME1L1Q96TA2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.28■■□□□ 1
YME1L1Q96TA2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YME1L1Q96TA2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.28■■□□□ 1
YME1L1Q96TA2 AC116351.2-201ENST00000606540 1585 ntBASIC21.28■■□□□ 1
YME1L1Q96TA2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
YME1L1Q96TA2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YME1L1Q96TA2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.28■■□□□ 1
YME1L1Q96TA2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.28■■□□□ 1
YME1L1Q96TA2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.28■■□□□ 1
YME1L1Q96TA2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.28■■□□□ 1
YME1L1Q96TA2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.28■■□□□ 1
YME1L1Q96TA2 FAM87A-204ENST00000613235 858 ntBASIC21.28■■□□□ 1
YME1L1Q96TA2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YME1L1Q96TA2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
YME1L1Q96TA2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.28■■□□□ 1
YME1L1Q96TA2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
YME1L1Q96TA2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.28■■□□□ 1
YME1L1Q96TA2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
YME1L1Q96TA2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.27■■□□□ 1
YME1L1Q96TA2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YME1L1Q96TA2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YME1L1Q96TA2 INGX-201ENST00000359239 846 ntBASIC21.27■■□□□ 1
YME1L1Q96TA2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.27■■□□□ 1
YME1L1Q96TA2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.27■■□□□ 1
YME1L1Q96TA2 KRT18P16-201ENST00000510337 1294 ntBASIC21.27■■□□□ 1
YME1L1Q96TA2 AC022616.7-201ENST00000525383 220 ntBASIC21.27■■□□□ 1
YME1L1Q96TA2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.27■■□□□ 1
YME1L1Q96TA2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.27■■□□□ 1
YME1L1Q96TA2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.27■■□□□ 1
YME1L1Q96TA2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YME1L1Q96TA2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.27■■□□□ 1
YME1L1Q96TA2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.27■■□□□ 1
YME1L1Q96TA2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.27■■□□□ 1
YME1L1Q96TA2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.27■■□□□ 1
YME1L1Q96TA2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YME1L1Q96TA2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
YME1L1Q96TA2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
YME1L1Q96TA2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
YME1L1Q96TA2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 UPK3BP1-201ENST00000428678 509 ntBASIC21.26■□□□□ 0.99
YME1L1Q96TA2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.26■□□□□ 0.99
YME1L1Q96TA2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms