Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 KRT18P22-201ENST00000402024 1347 ntBASIC20.07■□□□□ 0.8
HHIPQ96QV1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 AC116562.2-201ENST00000507042 360 ntBASIC20.07■□□□□ 0.8
HHIPQ96QV1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HHIPQ96QV1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.07■□□□□ 0.8
HHIPQ96QV1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.06■□□□□ 0.8
HHIPQ96QV1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.06■□□□□ 0.8
HHIPQ96QV1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.06■□□□□ 0.8
HHIPQ96QV1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.06■□□□□ 0.8
HHIPQ96QV1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.06■□□□□ 0.8
HHIPQ96QV1 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.06■□□□□ 0.8
HHIPQ96QV1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HHIPQ96QV1 AC121338.2-201ENST00000622535 1744 ntBASIC20.06■□□□□ 0.8
HHIPQ96QV1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
HHIPQ96QV1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HHIPQ96QV1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HHIPQ96QV1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HHIPQ96QV1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HHIPQ96QV1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HHIPQ96QV1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HHIPQ96QV1 SLC25A3P1-201ENST00000443844 931 ntBASIC20.05■□□□□ 0.8
HHIPQ96QV1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.05■□□□□ 0.8
HHIPQ96QV1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.05■□□□□ 0.8
HHIPQ96QV1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HHIPQ96QV1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HHIPQ96QV1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 KRT8P20-201ENST00000423953 1409 ntBASIC20.04■□□□□ 0.8
HHIPQ96QV1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.04■□□□□ 0.8
HHIPQ96QV1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HHIPQ96QV1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HHIPQ96QV1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HHIPQ96QV1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HHIPQ96QV1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HHIPQ96QV1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HHIPQ96QV1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HHIPQ96QV1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.03■□□□□ 0.8
HHIPQ96QV1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms