Protein–RNA interactions for Protein: Q96MG8

PCMTD1, Protein-L-isoaspartate O-methyltransferase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1Q96MG8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCMTD1Q96MG8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.77■■□□□ 1.07
PCMTD1Q96MG8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 AL162412.1-201ENST00000567129 965 ntBASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 MIR6821-201ENST00000617625 74 ntBASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.76■■□□□ 1.07
PCMTD1Q96MG8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCMTD1Q96MG8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 MCRIP2P1-201ENST00000394346 511 ntBASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 MFSD11-216ENST00000590393 1141 ntBASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.74■■□□□ 1.07
PCMTD1Q96MG8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 KRT18P5-201ENST00000436075 1291 ntBASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 RARRES2P4-201ENST00000514074 484 ntBASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
PCMTD1Q96MG8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 BCL2-203ENST00000589955 5011 ntBASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 KRT8P17-201ENST00000453110 1448 ntBASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCMTD1Q96MG8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCMTD1Q96MG8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCMTD1Q96MG8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
PCMTD1Q96MG8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCMTD1Q96MG8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCMTD1Q96MG8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.71■■□□□ 1.07
PCMTD1Q96MG8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCMTD1Q96MG8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms