Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALPK3Q96L96 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALPK3Q96L96 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALPK3Q96L96 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ALPK3Q96L96 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ALPK3Q96L96 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 GPALPP1-207ENST00000611650 899 ntBASIC21.74■■□□□ 1.07
ALPK3Q96L96 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 AC004951.3-201ENST00000418645 1148 ntBASIC21.74■■□□□ 1.07
ALPK3Q96L96 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 SPDYE13P-201ENST00000445314 798 ntBASIC21.74■■□□□ 1.07
ALPK3Q96L96 KRT17P6-201ENST00000453795 1220 ntBASIC21.74■■□□□ 1.07
ALPK3Q96L96 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.74■■□□□ 1.07
ALPK3Q96L96 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ALPK3Q96L96 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.73■■□□□ 1.07
ALPK3Q96L96 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALPK3Q96L96 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ALPK3Q96L96 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.73■■□□□ 1.07
ALPK3Q96L96 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALPK3Q96L96 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.73■■□□□ 1.07
ALPK3Q96L96 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.73■■□□□ 1.07
ALPK3Q96L96 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.73■■□□□ 1.07
ALPK3Q96L96 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ALPK3Q96L96 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.73■■□□□ 1.07
ALPK3Q96L96 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.73■■□□□ 1.07
ALPK3Q96L96 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALPK3Q96L96 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
ALPK3Q96L96 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ALPK3Q96L96 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALPK3Q96L96 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 AP006587.1-201ENST00000534129 1502 ntBASIC21.72■■□□□ 1.07
ALPK3Q96L96 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALPK3Q96L96 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ALPK3Q96L96 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ALPK3Q96L96 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 TSPY17P-201ENST00000450329 467 ntBASIC21.72■■□□□ 1.07
ALPK3Q96L96 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 AL136038.3-201ENST00000561909 1096 ntBASIC21.72■■□□□ 1.07
ALPK3Q96L96 HYMAI.1-201ENST00000620949 238 ntBASIC21.72■■□□□ 1.07
ALPK3Q96L96 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.72■■□□□ 1.07
ALPK3Q96L96 AC012676.1-201ENST00000574705 1949 ntBASIC21.72■■□□□ 1.07
ALPK3Q96L96 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALPK3Q96L96 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 AC092338.2-201ENST00000568827 1415 ntBASIC21.71■■□□□ 1.07
ALPK3Q96L96 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALPK3Q96L96 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ALPK3Q96L96 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.71■■□□□ 1.07
ALPK3Q96L96 AL023803.3-201ENST00000615559 522 ntBASIC21.71■■□□□ 1.07
ALPK3Q96L96 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALPK3Q96L96 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ALPK3Q96L96 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALPK3Q96L96 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ALPK3Q96L96 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALPK3Q96L96 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.71■■□□□ 1.07
ALPK3Q96L96 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ALPK3Q96L96 AP000593.1-201ENST00000393668 712 ntBASIC21.7■■□□□ 1.07
ALPK3Q96L96 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.7■■□□□ 1.07
ALPK3Q96L96 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
ALPK3Q96L96 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
ALPK3Q96L96 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALPK3Q96L96 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALPK3Q96L96 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.7■■□□□ 1.06
ALPK3Q96L96 KRT8P20-201ENST00000423953 1409 ntBASIC21.7■■□□□ 1.06
ALPK3Q96L96 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms