Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.3■■□□□ 1.32
CDCA5Q96FF9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.3■■□□□ 1.32
CDCA5Q96FF9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 AC092338.2-201ENST00000568827 1415 ntBASIC23.3■■□□□ 1.32
CDCA5Q96FF9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.3■■□□□ 1.32
CDCA5Q96FF9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 AL121603.2-201ENST00000557373 2117 ntBASIC23.29■■□□□ 1.32
CDCA5Q96FF9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 AC244015.2-201ENST00000616358 1861 ntBASIC23.29■■□□□ 1.32
CDCA5Q96FF9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 HLA-A-209ENST00000638375 975 ntBASIC23.29■■□□□ 1.32
CDCA5Q96FF9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 AC018553.1-201ENST00000616682 1458 ntBASIC23.29■■□□□ 1.32
CDCA5Q96FF9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDCA5Q96FF9 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.28■■□□□ 1.32
CDCA5Q96FF9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.28■■□□□ 1.32
CDCA5Q96FF9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 HCG4P8-203ENST00000443049 980 ntBASIC23.27■■□□□ 1.32
CDCA5Q96FF9 HOMER2P1-201ENST00000455653 964 ntBASIC23.27■■□□□ 1.32
CDCA5Q96FF9 AL671277.2-201ENST00000458060 996 ntBASIC23.27■■□□□ 1.32
CDCA5Q96FF9 AL359075.1-203ENST00000462729 1002 ntBASIC23.27■■□□□ 1.32
CDCA5Q96FF9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 CLEC4GP1-201ENST00000596555 870 ntBASIC23.27■■□□□ 1.32
CDCA5Q96FF9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCA5Q96FF9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCA5Q96FF9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDCA5Q96FF9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
CDCA5Q96FF9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.25■■□□□ 1.31
CDCA5Q96FF9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.25■■□□□ 1.31
CDCA5Q96FF9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDCA5Q96FF9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDCA5Q96FF9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms