Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN23Q96B33 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN23Q96B33 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN23Q96B33 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN23Q96B33 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN23Q96B33 AL023803.3-201ENST00000615559 522 ntBASIC19.88■□□□□ 0.77
CLDN23Q96B33 HLA-A-209ENST00000638375 975 ntBASIC19.88■□□□□ 0.77
CLDN23Q96B33 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN23Q96B33 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN23Q96B33 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.87■□□□□ 0.77
CLDN23Q96B33 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 AC018553.1-201ENST00000616682 1458 ntBASIC19.87■□□□□ 0.77
CLDN23Q96B33 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 IER3-202ENST00000376377 1350 ntBASIC19.87■□□□□ 0.77
CLDN23Q96B33 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 HOMER2P1-201ENST00000455653 964 ntBASIC19.87■□□□□ 0.77
CLDN23Q96B33 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN23Q96B33 AL049796.1-201ENST00000565336 1766 ntBASIC19.87■□□□□ 0.77
CLDN23Q96B33 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN23Q96B33 ECEL1P1-201ENST00000373592 1742 ntBASIC19.86■□□□□ 0.77
CLDN23Q96B33 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN23Q96B33 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN23Q96B33 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN23Q96B33 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN23Q96B33 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLDN23Q96B33 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN23Q96B33 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 AC026396.1-201ENST00000419388 421 ntBASIC19.85■□□□□ 0.77
CLDN23Q96B33 AL450487.1-201ENST00000426799 995 ntBASIC19.85■□□□□ 0.77
CLDN23Q96B33 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 TSPY17P-201ENST00000450329 467 ntBASIC19.85■□□□□ 0.77
CLDN23Q96B33 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 AL512604.3-201ENST00000569583 964 ntBASIC19.85■□□□□ 0.77
CLDN23Q96B33 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN23Q96B33 AL121603.2-201ENST00000557373 2117 ntBASIC19.85■□□□□ 0.77
CLDN23Q96B33 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN23Q96B33 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN23Q96B33 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLDN23Q96B33 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN23Q96B33 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLDN23Q96B33 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN23Q96B33 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLDN23Q96B33 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.84■□□□□ 0.77
CLDN23Q96B33 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN23Q96B33 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.84■□□□□ 0.77
CLDN23Q96B33 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN23Q96B33 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN23Q96B33 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.84■□□□□ 0.77
CLDN23Q96B33 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN23Q96B33 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN23Q96B33 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms