Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CPNE4Q96A23 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE4Q96A23 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE4Q96A23 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CPNE4Q96A23 RN7SL471P-201ENST00000580476 299 ntBASIC17.76■□□□□ 0.43
CPNE4Q96A23 MTDHP1-201ENST00000605323 784 ntBASIC17.76■□□□□ 0.43
CPNE4Q96A23 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE4Q96A23 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPNE4Q96A23 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE4Q96A23 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE4Q96A23 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE4Q96A23 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 AC233263.1-201ENST00000578059 224 ntBASIC17.75■□□□□ 0.43
CPNE4Q96A23 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE4Q96A23 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CPNE4Q96A23 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE4Q96A23 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE4Q96A23 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE4Q96A23 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE4Q96A23 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.74■□□□□ 0.43
CPNE4Q96A23 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 AC239809.2-201ENST00000415381 517 ntBASIC17.74■□□□□ 0.43
CPNE4Q96A23 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE4Q96A23 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE4Q96A23 AC116351.2-201ENST00000606540 1585 ntBASIC17.74■□□□□ 0.43
CPNE4Q96A23 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE4Q96A23 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE4Q96A23 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 C1QBPP2-201ENST00000528754 825 ntBASIC17.73■□□□□ 0.43
CPNE4Q96A23 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CPNE4Q96A23 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE4Q96A23 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms